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1000G Reference Panel for JASS for the European, African, East Asians, Admixed american, and South East Asian Ancestries

Domain:

healthcare

Record type:

dataset
Creator:
Julienne, Hanna
Publisher:
Zenodo
Host:avatar
We provide a reference panel for common SNPs (MAF > 1%) for the
East asian (EAS), African, South east Asian, Hispanic and European populations. They were built from 1000 Genomes consortium phase 3 data (hg38 build) for each ancestry. (The 1000 Genomes Project Consortium 2015).
[ 'chr', "snp_id", "MAF","pos",  "ref", "alt"]
Columns are:
1 -  Chromosome
2 - Variant ID
3 - Minor Allele Frequency
4 - Reference Allele
5 - Alternative Allele

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