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A MapReduce Approach for Ridge Regression in Neuroimaging-Genetic Studies

Domain:

healthcare

Record type:

paper
Creator:
da EicLagFro
Editor:
LabModMic
Publisher:
CCSD
Host:avatar
International audience In order to understand the large between-subject variability observed in brain organization and assess factor risks of brain diseases, massive efforts have been made in the last few years to acquire high-dimensional neuroimaging and genetic data on large cohorts of subjects. The statistical analysis of such high-dimensional and complex data is carried out with increasingly sophisticated techniques and represents a great computational challenge. To be fully exploited, the concurrent increase of computational power then requires designing new parallel algorithms. The MapReduce framework coupled with efficient algorithms permits to deliver a scalable analysis tool that deals with high-dimensional data and hundreds of permutations in a few hours. On a real functional MRI dataset, this tool shows promising results.

Visit

inria.hal.science

Tags

[INFO.INFO-DC]Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC][MATH.MATH-ST]Mathematics [math]/Statistics [math.ST][STAT.TH]Statistics [stat]/Statistics Theory [stat.TH][STAT.ML]Statistics [stat]/Machine Learning [stat.ML][INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM][SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SCCO.NEUR]Cognitive science/Neuroscience[SDV.GEN]Life Sciences [q-bio]/Genetics

Licenses

info:eu-repo/semantics/OpenAccess