This dataset comprises raw and processed environmental and
species-occurrence data used to assess current and future habitat
suitability of Juniperus procera and Olea europaea subsp. cuspidata in
Ethiopia. Current climatic conditions were represented by the 19 standard
WorldClim bioclimatic variables, which were downloaded as global raster
layers and cropped and masked to the geographical boundary of Ethiopia.
Future bioclimatic projections for the SSP2-4.5 (SSP245) and SSP5-8.5
(SSP585) scenarios were obtained using the CMIP6_world() function in R for
the selected Global Climate Model and future period and subsequently
cropped and masked to Ethiopia using the terra package. Elevation data at
approximately 40 m spatial resolution were obtained using the elevatr R
package and processed to derive two additional topographic predictors:
slope, expressed in degrees, and Topographic Position Index (TPI),
calculated using a 3 × 3 focal neighbourhood. Areas corresponding to lakes
were masked from the elevation-derived topographic layers. Species
occurrence records for J. procera and O. europaea subsp. cuspidata were
obtained from the Global Biodiversity Information Facility (GBIF) using
the rgbif R package and Google Earth 3D view and geographically restricted
to Ethiopia. The resulting environmental and occurrence datasets were
prepared for species distribution modelling to evaluate changes in habitat
suitability under current and projected future climate conditions. All
data acquisition and processing procedures were implemented in R version
4.6.0, primarily using the terra, elevatr, and rgbif packages. The
repository includes the processed environmental raster datasets, species
occurrence data, and associated R scripts to facilitate transparency,
reproducibility, and reuse of the study. Method 1. the global bioclimatic data were downloaded and
subsequently cropped and masked to the geographical boundary of
Ethiopia. Method for 2. The elevation data were
downloaded using the elevatr R package and subsequently cropped to the
geographical boundary of Ethiopia. Areas corresponding to Ethiopian lakes
were masked using lake boundary polygons. Method for 3.
The Future climate projections were obtained using the CMIP6_world()
function in R for the selected Global Climate Model (GCM) and future time
period. The resulting global raster layers were subsequently cropped and
masked to the geographical boundary of Ethiopia using functions available
in the terra package, producing Ethiopia-specific future bioclimatic
datasets for subsequent species distribution modelling.
Method for 4. The data were obtained using the CMIP6_world()
function in R for the selected Global Climate Model and future time
period, following the same procedures described for the SSP2-4.5 scenario.
The resulting global raster layers were cropped and masked to the
geographical boundary of Ethiopia using the terra package.
Method for 5. Slope was derived from the elevation data described
above using the terrain() function in the terra R package:
library(terra) slope <-
terrain(Ethiopia_elev, v =
"slope", unit =
"degrees") The resulting slope raster was
subsequently masked using the boundary polygons of Ethiopian
lakes. Method for 6. TPI was derived from the elevation
raster using a 3 × 3 focal neighbourhood. It was calculated as the
difference between the elevation of each raster cell and the mean
elevation of its surrounding cells using functions available in the terra
package: library(terra) # Calculate
mean elevation within a 3 × 3 neighbourhood mean_elev
<- focal( Ethiopia_elev,
w = matrix(1, 3, 3), fun = mean,
na.rm = TRUE ) # Calculate
Topographic Position Index tpi <- Ethiopia_elev
- mean_elev The resulting TPI raster was subsequently
masked using the boundary polygons of Ethiopian lakes.
Positive TPI values indicate locations that are higher than their
surrounding areas, whereas negative values indicate locations that are
lower than their surroundings. Method for 7: Records
were retrieved by specifying the scientific name of the species and were
subsequently clipped to the geographical boundary of Ethiopia.
Method for 8: Records were retrieved by specifying the scientific
name of the species and were subsequently clipped to the geographical
boundary of Ethiopia. # Data from: Climate-driven changes in habitat suitability of two keystone
species in dry Afromontane forests of Ethiopia Dataset DOI:
[10.5061/dryad.q573n5tz5](
doi.org) This
repository contains the raw and processed data used in the manuscript
**“Climate-Driven Changes in Habitat Suitability of Two Keystone Species
in Dry Afromontane Forests of Ethiopia,”** accepted for publication. The
repository includes the following datasets and associated R scripts. **1.
Ethiopia_current_clim.tif** This raster dataset contains the 19 standard
WorldClim bioclimatic variables representing current climatic conditions.
The global bioclimatic data were downloaded and subsequently cropped and
masked to the geographical boundary of Ethiopia. **2.
Ethiopia_elevation_no_lakes.tif** This raster dataset contains elevation
data for Ethiopia at approximately 40 m spatial resolution. The elevation
data were downloaded using the elevatr R package and subsequently cropped
to the geographical boundary of Ethiopia. Areas corresponding to Ethiopian
lakes were masked using lake boundary polygons. **3.
Ethiopia_future_245.tif** This raster dataset contains future bioclimatic
projections under the SSP2-4.5 (SSP245) climate scenario. Future climate
projections were obtained using the CMIP6_world() function in R for the
selected Global Climate Model (GCM) and future time period. The resulting
global raster layers were subsequently cropped and masked to the
geographical boundary of Ethiopia using functions available in the terra
package, producing Ethiopia-specific future bioclimatic datasets for
subsequent species distribution modelling. **4. Ethiopia_future_585.tif**
This raster dataset contains future bioclimatic projections under the
SSP5-8.5 (SSP585) climate scenario. The data were obtained using the
CMIP6_world() function in R for the selected Global Climate Model and
future time period, following the same procedures described for the
SSP2-4.5 scenario. The resulting global raster layers were cropped and
masked to the geographical boundary of Ethiopia using the terra package.
**5. Ethiopia_slope_no_lakes.tif** This raster dataset contains slope
values expressed in degrees. Slope was derived from the elevation data
described above using the terrain() function in the terra R package:
library(terra) slope <- terrain(Ethiopia_elev, v =
"slope", unit = "degrees") The
resulting slope raster was subsequently masked using the boundary polygons
of Ethiopian lakes. **6. Ethiopia_tpi_no_lakes.tif** This raster dataset
contains the Topographic Position Index (TPI). TPI was derived from the
elevation raster using a 3 × 3 focal neighbourhood. It was calculated as
the difference between the elevation of each raster cell and the mean
elevation of its surrounding cells using functions available in the terra
package: library(terra) \# Calculate mean elevation within a 3 × 3
neighbourhood mean_elev <- focal( Ethiopia_elev, w = matrix(1, 3,
3), fun = mean, na.rm = TRUE ) \# Calculate Topographic Position Index
tpi <- Ethiopia_elev - mean_elev The resulting TPI raster was
subsequently masked using the boundary polygons of Ethiopian lakes.
Positive TPI values indicate locations that are higher than their
surrounding areas, whereas negative values indicate locations that are
lower than their surroundings. **7. Occurrence data for** ***Juniperus
procera*** (Occurence_data_of_Juniperus_procera.xls) Occurrence records
for *Juniperus procera* were obtained from the Global Biodiversity
Information Facility (GBIF) using the rgbif R package. Records were
retrieved by specifying the scientific name of the species and were
subsequently clipped to the geographical boundary of Ethiopia. Additional
data were generated using Google Earth 3D and information in herbarium
sheets of the collection at the National Herbarium of Addis Ababa
University **8. Occurrence data for** ***Olea europaea*** **subsp.**
***cuspidata*** (Occurence_data_of_Olea_europaea.xls) Occurrence records
for *Olea europaea* subsp. *cuspidata* were obtained from the Global
Biodiversity Information Facility (GBIF) using the rgbif R package.
Records were retrieved by specifying the scientific name of the species
and were subsequently clipped to the geographical boundary of Ethiopia.
Additional data were generated using Google Earth 3D and information in
herbarium sheets of the collection at the National Herbarium of Addis
Ababa University. Neither species is considered endangered in Ethiopia.
However, both are important native tree species of the dry Afromontane
forests of the Ethiopian Highlands, which are recognized as areas of high
biodiversity and conservation importance. Although the species are not
currently classified as endangered, their populations and habitats may be
subject to increasing pressures from habitat degradation, land-use change,
deforestation, and climate change, rather than from targeted hunting.
Therefore, reporting the geographical coordinates to four decimal places
does not, in this context, present a meaningful additional conservation
risk or facilitate the targeted removal of individuals of either species.
**Software Requirements** The data processing and analysis scripts were
developed and executed in **R version 4.6.0**. The principal R packages
used for data acquisition and processing include: * terra * elevatr *
rgbif