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Data from: Identifying drivers of spatial variation in occupancy with limited replication camera trap data

Domain:

environment and energy

Record type:

datasetpaper
Creator:
HepErhAnderson, T. Michael
Publisher:
Dry
Host:avatar
Occupancy models are widely used in camera trap studies to analyze species presence, abundance, and geographic distribution, among other important ecological quantities. These models account for imperfect detection using a latent variable to distinguish between true presence/absence and observed detection of a species. Under certain experimental setups, parameter estimation in a latent variable framework can be challenging. Several studies have issued guidelines on the number of independent replicated observations (surveys) needed for each unchanging occupancy field (season) to ensure reliable estimation. In this paper we present a spatio-temporal occupancy model, and show through a simulation study that it can be fit to data obtained from a \textit{single} survey per season, so long as the number of seasons is sufficiently large. We include an application using camera-trap data on the Thomson's gazelle in the Serengeti in Tanzania. Serengeti_Thomsons_Gazelle_Application_DataData for the manuscript "Identifying Drivers of Spatial Variation in Occupancy with Limited Replication Camera Trap Data", by Hepler, Staci; Erhardt, Robert; Anderson, T. Michael. Contains data from the Snapshot Serengeti camera trap study. The response variable 'Thomson's Gazelle' is a binary indicator of presence/absence based on the camera trap images. The variable information came from field work, with the exception of NDVI which is based on NASA's MODIS satellite.

Visit

doi.orgdatadryad.org

Tags

occupancy modelBayesian modelingSerengeticamera trap

Licenses

Creative Commons Zero v1.0 Universalhttps://creativecommons.org/publicdomain/zero/1.0/legalcode