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fbkengne/ssamixr: ssamixr v0.1.0

Domain:

healthcare

Record type:

softwaredataset
Creator:
fbk
Publisher:
Zenodo
Host:avatar

This is the first public release of the ssamixr R package, providing a harmonized collection of 171 social contact matrices from 18 Sub-Saharan African countries.

🔍 Key features

  • 171 matrices across 18 countries
  • Metadata for country, study, location type, and period (pre‑COVID vs COVID)
  • Functions to list, filter, and retrieve matrices:
    • list_matrices()
    • filter_matrices()
    • get_matrix()
  • Built‑in documentation and examples
  • Appendix PDF with full catalogue of matrices (heatmaps + descriptions)

📄 Appendix

A complete appendix summarizing all matrices is included in the package at:

system.file("extdata", "social_contact_appendix.pdf", package = "ssamixr")

📦 Installation

if (!requireNamespace("devtools", quietly = TRUE)) {
install.packages("devtools")
}
devtools::install_github("fbkengne/ssamixr")
library(ssamixr)

📝 Notes

This release is intended for reviewers and early users. Future versions will expand documentation, add visualizations, and include additional metadata.

Visit

doi.org

Licenses

info:eu-repo/semantics/openAccessCreative Commons Attribution 4.0 Internationalhttps://creativecommons.org/licenses/by/4.0/legalcode

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