genopaths-africa/genopaths-api

GenoPaths API - REST API Server for GenoPaths Platform # genopaths-api GenoPaths API - REST API Server for GenoPaths Platform ## Setup 1. Create virtualenv : python -m virtualenv venv && source venv/bin/activate 2. Install dependencies: pip install -r requirements.txt ## Accessing migration commands ``` flask db --help #migration help # initialize the migration repositotry. This is already done flask init # Create a new migration flask db migrate #autogenrate revision file flask db revision -m "create some table" flask db upgrade #apply migrations flask db downgrade # undo previous migration ``` ## Using docker in dev ``` docker-compose -f docker-compose-dev.yml #dconnect to postgresql docker-compose -f docker-compose-dev.yml exec genopaths_db psql -U genopaths -h localhost -d genopaths ``` ## Access database ``` docker-compose -f docker-compose-dev.yml exec genopaths_db psql -U genopaths -h localhost -d genopaths ``` ## Running tests ``` python -m pytest -s ``` # Seeding data ``` flask seed run ```