jeffeaton/eppasm-rhybrid-paper

Code for reproducing analysis: "EPP-ASM and the r-hybrid model: new tools for estimating HIV incidence trends in sub-Saharan Africa" # eppasm-rhybrid-paper Code for reproducing analysis in the manuscript Eaton _et al._ "EPP-ASM and the r-hybrid model: new tools for estimating HIV incidence trends in sub-Saharan Africa" (in preparation). ## Inputs The directory `/inputs` includes code for preparing the model inputs from Spectrum files. ## Model fitting The file `fits/fits.R` includes R code for fitting the model. ## Analysis The script `analysis.R` contains code for reproducing all analysis, tables, and figures in the manuscript.