kipkurui/Kibet-F1000Research

Supporting Documents and Data accompanying Kibet and Machanick (2015) # Kibet and Machanick (2016)-F1000Research Supplementary data and code This Repository accompanies, Kibet CK and Machanick P. Transcription factor motif quality assessment requires systematic comparative analysis [version 1; referees: 2 approved with reservations]. F1000Research 2015, 4(ISCB Comm J):1429 (doi: 10.12688/f1000research.7408.1) It contains Data, code and an Ipython notebook for reproducibility of the research carried out. Structure of the repository is as follows: ## Data This contains raw and processed data. For PBM and ChIP-seq data. ## Results Results generated using scripts in the code folder ## Code Folder stores modules used. It also contains an Ipython notebook that provides a walkthrough the execution of the codes and further procersing of the data for visualization. It also contains a requirements file that state the python modules required for proper use of the python code provided. Separate notebooks are provided for PBM and ChIP-seq data processing ## Launch with Binder: