Simon-LoriereLab/RVFVMadagascar

Genomic Epidemiology of Rift Valley Fever virus, focus on Madagascar # Genomics of the outbreak of Rift Valley fever virus in Madagascar 2021 This repository analyzes genomes of Rift Valley fever virus (RVFV) circulating in madagascar 2021 (n=17) using Nextstrain. The build was constructed using a total of 147 RVFV full-length genomes (all 3 segments). This work is ongoing, and is performed in collaboration with Institut Pasteur de Madagascar contact: Dr Philippe Dussart. Please do not hesitate to contact us if this could be relevant to your work! The phylogenies of each segment (S, M and L) can be visualized at nextstrain.org . This work is made possible by the open sharing of genetic data by research groups from all over the world. We gratefully acknowledge their contributions.