India Africa Asia HGDP HapMap pops

Domain:

healthcare

Record type:

dataset

Creator:

Bla

Host:

The data consists in genome-wide SNPs that were obtained from 5 different sources, keeping the SNPs common to all 5 sources. The combined dataset consisted in 3146 autosomal SNPs for 4025 individuals from 167 populations. It was analyzed using FRAPPE, with default settings. The bars represent the percentages of ancestry in each of the clusters determined by FRAPPE. The clustering analyses were performed for 2 to 16 clusters. Here, the results shown on this bar plots are average percentages for populations.

Visit

figshare.com

Licenses

CC BY 4.0

India Africa Asia HGDP HapMap frappe K12

These are the results of a structure analysis performed by FRAPPE, with default settings and K=12

India Africa Asia HGDP HapMap frappe K15

These are the results of a structure analysis performed by FRAPPE, with default settings and K=15

India Africa Asia HGDP HapMap frappe K14

These are the results of a structure analysis performed by FRAPPE, with default settings and K=14

India Africa Asia HGDP HapMap frappe K2

These are the results of a structure analysis performed by FRAPPE, with default settings and K=2,

India Africa Asia HGDP HapMap frappe K11

These are the results of a structure analysis performed by FRAPPE, with default settings and K=11

India Africa Asia HGDP HapMap frappe K9

These are the results of a structure analysis performed by FRAPPE, with default settings and K=9,