Despite recent advances in the development of therapeutics for human African trypanosomiasis, new treatments are needed to populate the drug pipeline in case of failure and resistance. A previously reported high throughput screen of human kinase inhibitors identified the pyrazolopyridine scaffold as an inhibitor of
Trypanosoma brucei
(
T.b
.), which was subsequently optimized for antiparasitic activity. We report the structure-activity relationships (SAR) of the series, focused on improving antitrypanosomal activity and ADME properties, while using structure-based drug design (SBDD) to introduce parasite selectivity. Through these efforts, we identified analogs up to 11-fold more potent than the initial hits, and with up to 40-fold improvement in aqueous solubility. Selectivity for
T. brucei
over human kinases remains an area for improvement.