PANGEA-HIV methods comparison exercise: simulations

Domain:

healthcare

Record type:

dataset

Creator:

Publisher:

fig

Host:

PANGEA-HIV (Phylogenetics and Networks for Generalised HIV Epidemics in Africa) is a major new initiative funded by the Bill and Melinda Gates Foundation to generate a large amount of next generation sequence data and to provide phylogenetic tools to measure the impact of HIV prevention efforts in generalized epidemics in sub-Saharan Africa. Research groups were invited to participate in a blinded methods comparison exercise on simulated HIV sequence data sets to test the performance of current phylogenetic methods before their application on real data. This file set provides the simulation data sets that were used in the exercise. Please see the README files for further information.

Visit

doi.org figshare.com

Licenses

Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode

Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.

Viral phylogenetic methods contribute to understanding how HIV spreads in populations, and thereby h

OluwasegunIsaac/pangea: PANGEA

PANGEA - Predictive Analytics and Genotypic Evaluation for AMR in Africa This README file provides

OluwasegunIsaac/pangea

Predictive Analytics and Genotypic Evaluation for AMR in Africa # PANGEA - Predictive Analytics and

PANGEA-HIV 2L: Phylogenetics And Networks for Generalised Epidemics in Africa

Purpose of reviewThe HIV epidemic in sub-Saharan Africa is far from being under control and the a