Unique recombinant genome mosaics arising during mixed <i>Tomato yellow leaf curl virus</i> (TYX) and <i>Tomato leaf curl Comoros virus</i> (TOX) infections.

Each line represents one mosaic genome linearized at the virion strand origin of replication. The virus names to the left are in the form P[plant number]R[recombinant number]. Some recombinants are clearly minor variants of the same mosaic structure and are labelled a, b, c etc. Numbers of clones and breakpoints for each unique recombinant sequence are specified on the right of the figure. Eighteen of the 50 mosaics were observed in multiple clones from the same plant and are therefore probably not defective: These form the basis of our FIT dataset.