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Additional file 10: of Comparative whole genome re-sequencing analysis in upland New Rice for Africa: insights into the breeding history and respective genome compositions

Domaine:

agriculture
Créateur:
YamGarSuzSol
Éditeur:
fig
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Figure S3. Graphical representation of allelic patterns in the two fucosyltransferase. Substitution type indicates amino acids of WAB56–104-allele to CG14-allele. (a) LOC_Os06g10910 and (b) LOC_Os06g10920. Varietal names are abbreviated as follows: Nipponbare, Ni; WAB56–104, WAB; NERICA 1, NU1; NERICA 2, NU2; NERICA 3, NU3; NERICA 4, NU4; NERICA 5, NU5; NERICA 7, NU7; NERICA 8, NU8; NERICA 9, NU9. CDS posi. and A.A. posi. Represent positions in coding sequences and positions in deduced amino acid sequences, respectively. Alleles of CG14 are colored in gray. (PPTX 205 kb)

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GeneticsFOS: Biological sciencesBiotechnologyEvolutionary BiologyBiological Sciences not elsewhere classifiedInformation Systems not elsewhere classifiedInfectious DiseasesFOS: Health sciencesPlant BiologyComputational Biology

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Additional file 9: of Comparative whole genome re-sequencing analysis in upland New Rice for Africa: insights into the breeding history and respective genome compositions

Figure S2. Phylogeny of genes for fucogalactoxyloglucan biosynthesis. Predicted proteins sequences w

Additional file 2: of Comparative whole genome re-sequencing analysis in upland New Rice for Africa: insights into the breeding history and respective genome compositions

Figure S1. k-mer analysis (k-merlength = 17). The X-axis shows k-mer depth, and the Y-axis shows pro