Logo Lanfrica
  • Accueil
  • Atlas
  • Analyses
  • Documentation
  • Sign in

© 2026 Lanfrica. Tous droits réservés. Tous les droits d'auteur des ressources affichées sur le site Web Lanfrica appartiennent aux détenteurs de droits d'auteur d'origine, sauf indication contraire explicite.

African-born Victorian residents with HIV: phylogenetic analysis of V3 env sequences and reference subtype A, B and C sequences.

Domaine:

healthcare

Type de record:

dataset
Créateur:
ChrClaZamAnn
Hôte:avatar

Neighbour joining tree reflecting the genetic relationship between HIV-1 isolates from African-born Victorians, the most homologous HIV-1 strains and selected reference strains. Study isolates are indicated in bold followed by Country of Birth/Country of reported exposure. Significant bootstrap values are indicated at the relevant node. Sequences were analysed over a 369bp region corresponding to the HIV-1 envelope region and spanning nucleotides 6984–7353 (HXB2 coordinates). The scale bar represents 2% genetic distance. Country codes: AUS – Australia; BOT- Botswana; CAN – Canada; CHI-China; CZE – Czech Republic; DJI – Djibouti; ERI – Eritrea; ETH – Ethiopia; EUR – Europe; FIN- Finland; FRA – France; GER – Germany; GHA – Ghana; GUI – Guinea Bissau; KEN – Kenya; MAL – Malawi; NET – The Netherlands; PNG – Papua New Guinea; SAF – South Africa; SWI – Switzerland; TAN – Tanzania; USA – United States of America; 23 – Uganda; 24 – Zambia; 25 – Zimbabwe.

Visit

figshare.com

Tags

MedicineSociologyBiological SciencesEvolutionary biologyEvolutionary systematicsphylogeneticsepidemiologyInfectious disease epidemiologyMolecular epidemiologyInfectious diseases+13

Licenses

CC BY 4.0

Similaires

Maximum likelihood phylogenetic tree based on 1,981 HIV-1 subtype C <i>pol</i> (∼1,000 pb) sequences.Maximum likelihood phylogenetic analysis of partial CHIKV E1 gene sequences.Maximum likelihood phylogenetic tree constructed from 56 HIV-1 C <i>pol</i> sequences from Senegal and 121 close relatives.High Antigenic Cross-Reactivity of the V3 Consensus Sequences of HIV-1 gp120HIV Type 1 Group M Subtype G in Cameroon: Five Genome SequencesBayesian tree with timescale of 56 HIV-1 C <i>pol</i> sequences from Senegal.

Maximum likelihood phylogenetic tree based on 1,981 HIV-1 subtype C <i>pol</i> (∼1,000 pb) sequences.

Sequences were sampled at different countries from the east (n = 352), central (n =

Maximum likelihood phylogenetic analysis of partial CHIKV E1 gene sequences.

A phylogeny of 420 CHIKV strains with an O’nyong-nyong strain used as an outgroup (not shown) bui

Maximum likelihood phylogenetic tree constructed from 56 HIV-1 C <i>pol</i> sequences from Senegal and 121 close relatives.

Detailed maximum likelihood (PhyML) phylogenetic tree constructed using 1,011 nucleotide sites of

High Antigenic Cross-Reactivity of the V3 Consensus Sequences of HIV-1 gp120

The principal neutralization determinant (PND) of the human immunodeficiency virus type 1 (HIV-1) is

HIV Type 1 Group M Subtype G in Cameroon: Five Genome Sequences

Near full-length viral genome sequences were obtained for five putative subtype G candidates identif

Bayesian tree with timescale of 56 HIV-1 C <i>pol</i> sequences from Senegal.

Maximum clade credibility tree with time scale obtained with BEAST using 1,011 nucleotide sites o