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Bayesian skyride plot of HIV-1 C demographic growth in Senegal using 56 <i>pol</i> sequences.

Domaine:

healthcare

Type de record:

paper
Créateur:
MatNafNicDen
Hôte:avatar

Estimates of HIV-1 C effective number of infections (Ne) over time from 56 Senegalese pol sequences using a Bayesian skyride plot in BEAST with relaxed uncorrelated lognormal molecular clock and moderately informative substitution rate prior (ucld.mean Normal: 2.5×10−3, 7.5×10−4). The X-axis represents the time in year. The Y-axis represents the HIV-1 effective number of infections (log10 scale). The black line marks the median estimate for Ne and the blue shadow region displays the 95% highest posterior density (HPD) interval.

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figshare.com

Tags

BiotechnologyInfectious DiseasesVirologyskyridehiv-1senegal56

Licenses

CC BY 4.0

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