botswana-harvard/getresults-csv

Import laboratory result from a CSV file (like FACSCalibur Multiset) # getresults-csv Import laboratory result from a CSV file. Add to settings: INSTALLED_APPS = ( ... 'getresults_csv', ... ) CSV_FILE_PATH = '~/interface/cd4/' CSV_FILE_EXT = [('*.csv', '*\.csv$'), ] CSV_FILE_EXT is a tuple of the file pattern and the regex file pattern used by Django FileField. Create a subbfolder of CSV_FILE_PATH named 'archive'. Define a csv format. This can be done in admin. from getresults_csv.models import CsvFormat CsvFormat.objects.create() Start the observer (overrides settings above): python manage.py start_observer multiset ~/interface/cd4 The `testdata` folder has sample CSV files to configure csv_format, csv_dictionaries, etc. You could create similar files to meet your needs and then use the util loaders to load the information. Defining a SaveHandler The observer accepts custom SaveHandler classes. There is a BD FACSCalibur Multiset SaveHandler in the `getresults` subfolder of this repo. Use this as an example for customization.