giffordlabcvr/african-stars-flu-refset-workshop

Training materials for the African STARS Fellowship — selecting influenza virus reference sets, with tutorials using Nextstrain and other tools. # African STARS Fellowship: Influenza Virus Reference Set Workshop Training materials for the African STARS Fellowship, selecting influenza virus reference sets, with tutorials using Nextstrain and other tools. A 2-hour workshop covering how to select a reference sequence set for epidemiological analysis of influenza sequences. **Goal:** by the end, students can assemble a defensible "reference set" for influenza (seasonal & avian), wire it into a Nextstrain build, and QC with Nextclade. 1) Background Tutorial (60 min) 2) Hands-on Lab Tutorial (60 min) * * * * *