giocarpi/Pf_wgs_Zambia

This repository stores the source data and code for the manuscript entitled "Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia". # Pf_wgs_Zambia This repository stores the source data and code for the nationwide genomic surveillance study of P. falciparum parasites across Zambia from dried-blood spot samples collected during the 2018 Zambia Malaria Indicator Survey which reports key genetic metrics informing transmission intensity, genetic relatedness, and selection. Citation: Fola AA, He Q, Xie S, Thimmapuram J, Bhide KP, Dorman J, Ciubotariu II, Mwenda MC, Mambwe B, Mulube C, Hawela M, Norris DE, Moss WJ, Bridges DJ, Carpi G. Genomics reveals heterogeneous Plasmodium falciparum transmission and selection signals in Zambia. Commun Med (Lond). 2024 Apr 6;4(1):67. doi: 10.1038/s43856-024-00498-8. PMID: 38582941; PMCID: PMC10998850.