InstituteforDiseaseModeling/laser-polio-nigeria

Companion package for laser-polio with calibration scripts and data for Nigeria and environs # laser-polio-nigeria Nigeria-specific inputs, examples, and calibration tools for laser-polio. The core contribution is `build_nigeria_inputs()` — a function that assembles all simulation inputs from the Nigeria data package and passes them to `lp.run_sim()`. ## Install **Using the library in your own code** — pip install the package: ```bash pip install --extra-index-url packages.idmod.org laser-polio-nigeria ``` **Running scripts, examples, or calibrations** — clone the repo instead. The `examples/` scripts, `config/` YAML files, and calibration entry point all require the repo to be present locally: ```bash git clone github.com cd laser-polio-nigeria pip install -e . ``` **Local development across all three repos** — if you want editable installs of `laser-polio` and `laser-polio-calibration` alongside this repo (e.g., to make changes to the core engine or calibration workflows), clone all three repos as siblings and install from source into the `laser-polio-nigeria` venv: ```bash # Clone the three repos as siblings (e.g., under ~/github/) git clone github.com git clone github.com git clone github.com # Create and activate a venv inside laser-polio-nigeria cd laser-polio-nigeria uv venv source .venv/bin/activate # Install laser-polio editable uv pip install -e ../laser-polio # Build and install laser-polio-calibration from a local wheel cd ../laser-polio-calibration uv build uv pip install dist/laser_polio_calibration-0.1.0-py3-none-any.whl # Install laser-polio-nigeria editable cd ../laser-polio-nigeria uv pip install -e . ``` With `laser-polio` and `laser-polio-calibration` already installed, the final `uv pip install -e .` resolves cleanly without needing the IDM extra-index …