kandjoniyendouname-gif/Malaria-Temporal-Seasonal-and-Climatic-Dynamics-in-Ad-tikop-Togo-2022-2024-

# Malaria Temporal, Seasonal and Climatic Dynamics in Adétikopé, Togo (2022-2024) ## Project Overview This repository contains the full analytical workflow used to describe the temporal, seasonal, climatic, and entomological dynamics of malaria transmission in Adétikopé (Togo) between 2022 and 2024. The project was conducted as part of a Master’s thesis in One Haealth. All analyses were implemented in Python based on sentinel surveillance, meteorological, and entomological data. ## Academic Context • Project owner & thesis author: ATTISSO • Degree: Master’s thesis (One health) • Institution: University of Lomé • Study period: 2022–2024 • Study area: Adétikopé, Togo ### This repository serves as the computational and analytical support for the thesis. ### Contributions • Protocol conception, data analysis, statistical modeling, visualization, scientific interpretation: Conducted by the repository contributor (code author) • Conceptualization, data ownership, and scientific interpretation: ATTISSO ### This repository reflects a collaborative academic work, with a clear distinction between scientific ownership and technical implementation. ### Objectives The main objectives of this project are to: • Describe the monthly, seasonal, and interannual evolution of confirmed malaria cases and prevalence. • Compare malaria prevalence across transmission seasons (high, transition, low) and years using two-way ANOVA. • Explore graphical and statistical relationships between climatic variables (rainfall, temperature, humidity) and malaria indicators. • Model malaria case counts during the low transmission season using Poisson and Negative Binomial regression. • Describe entomological characteristics of larval breeding sites associated with malaria transmission. Data Description The main dataset used is: Clean_data_for_M._ATTISSO 06 01 2026.xls It includes: • Monthly malaria indicators (suspected cases, confirmed cases, prevalence) • Age stratification ( …