ThatGuyBassam/morocco-ntd-dashboard

Interactive map of neglected tropical diseases across Morocco's 12 regions — disease burden, healthcare infrastructure, and genomic susceptibility data. # 🗺 Morocco NTD Dashboard An interactive dashboard mapping the burden of neglected tropical diseases across Morocco's 12 administrative regions. Combines official epidemiological data, healthcare infrastructure, and genomic susceptibility information in one place. Built alongside pyGeno Scouter. --- ## Live preview **→ Open interactive preview** This is a lightweight HTML version hosted on GitHub Pages — no installation required, works in any browser and on mobile. It is a visual preview only and lacks some functionality available in the full app: - Gene Explorer (pyGeno genomic coordinates and ClinVar variants require a local Python environment) - ClinVar live queries - Region click detail panel with physician density - Language toggle persistence across sessions For the full experience, run the Streamlit app locally. --- ## Screenshots **NTD Map — Tuberculosis with region hover:** **Healthcare Infrastructure — physician density by region:** **Gene Explorer — pyGeno coordinates + ClinVar pathogenic variants:** --- ## What it does - Interactive choropleth map of Morocco's 12 regions colored by disease incidence per 100,000 inhabitants (normalized with RGPH 2024 population data) - Disease selector — switch between 5 diseases and a healthcare infrastructure layer - Click any region on the map to see all disease burdens and physician density for that region - Gene Explorer — pyGeno genomic coordinates and ClinVar pathogenic variants for susceptibility genes associated with each disease - French / English language toggle - Dark theme consistent with pyGeno Scouter --- ## Diseases covered | Disease | Year | National total | Data confidence | |---|---|---|---| | Cutaneous Leishmaniasis | 2023 | 2,359 cases | CONFIRMED | | Visceral Leishmaniasis | 2023 | 73 cases | NO REGIONAL DATA | | Human Rabies | 2024 | 33 deaths | PROPORTIONAL | | Imported Malaria | 2023 | 622 cases | PARTIAL | | Tuberculosis | 2023 | 32,429 cases | CONFIRMED | --- ## Data conf …