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Population-level structural variant allele frequencies associated with a pan-African genomic study

Domaine:

healthcare

Type de record:

dataset
Créateur:
Zha
Éditeur:
Fan, Shaohua
Éditeur:
Zenodo
Hôte:avatar
This dataset provides population-level allele-frequency summaries for high-confidence structural variants analyzed in the study “Long-read sequencing reveals a pan-African structural variation landscape driving phenotypic diversity and local adaptation.” The dataset contains allele-frequency estimates for high-confidence structural variants genotyped across 179 individuals from 12 Indigenous African populations: Amhara, Dizi, Chabu, Mursi, Hadza, Sandawe, rainforest hunter-gatherers (RHG), Fulani, Tikari, Herero, Ju|'hoansi, and !Xoo. This dataset contains population-level summary statistics. The format file contains one row per structural variant, with population-specific allele-frequency and allele-count fields provided in separate columns.  Coordinates are reported relative to the GRCh38/hg38 human reference genome.

Visit

doi.org

Languages

AmharicFulaFulfulde, AdamawaFulfulde, BorguFulfulde, Central-Eastern NigerFulfulde, MaasinaFulfulde, NigerianFulfulde, Western NigerHadzaHerero+5

Tags

Structural variantIndigenous African populationsLocal adaptationPopulation genomicsPositive selection scan

Licenses

Creative Commons Attribution 4.0 Internationalhttps://creativecommons.org/licenses/by/4.0/legalcodeCopyright (c) 2026 Jiaqi Zhang and contributorshttp://rightsstatements.org/vocab/InC/1.0/

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