Replication Data for: Epidemiology of COVID-19 infections on routine PCR and serology testing in Coastal Kenya

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection began in Wuhan, China in December 2019 and rapidly spread around the world causing a disease called the Corona virus disease 2019 (COVID-19). The first case of COVID-19 was detected in the Kenyan Coast in 21st March 2020. Since then KEMRI-Wellcome Trust Research Programme has been the main testing site for the Coastal part of Kenya. Prior to testing, each participant was required to fill a case investigation form (CIF) which was later used in generating our datasets. The first dataset: 1) "Combined_Covid_EpiDataset" contains the characteristics of each of the 100665 cases and has been used to describe the Epidemiology of SARS-CoV-2 infections by describing the age, gender, prevalence of infections and the proportion of symptomatic and asymptomatic cases. The second dataset: "Covid_serodataset" containing 2458 observations was used to describe monthly Sero-epidemiology of individuals who were either SARS-CoV-2 positive or negative at the time of testing. Note: this dataset contains counties that are outside the Coastal part of Kenya which have been filtered off in the code

Data Access: Restricted Access to these data requires submission of a formal request for consideration by our Data Governance Committee. How to request Download and complete the data request form Email completed data request form to the Data Governance Committee at dgc@kemri-wellcome.org License: Creative Commons Attribution 4.0 International