The global pursuit of sustainable water and sanitation management is currently hindered by a lack of safely managed infrastructure in low-income and decentralized settings. While biological treatment through anaerobic digestion stabilizes fecal waste and produces renewable biogas, the resulting liquid remains a biological hazard. Thermal pasteurization is a highly effective method for removing pathogens, yet current decentralized prototypes often fail to meet safety standards during continuous operation. This research addresses this gap by investigating the transition from low-cost, custom- built models to robust treatment systems that utilize adapted, mass-produced components and standardized engineering practices. Conducted at a research site in Mzuzu, Malawi, the study evaluates a modular gas-driven treatment unit. The system integrates a modified domestic water boiler, a plate heat exchanger for energy recovery, and a large thermal residence tank. To overcome factory- set safety limits intended for home use, the boiler’s temperature-sensing logic was physically modified with an analog resistor, allowing the system to maintain a heating jacket at 85°C. This ensures the internal waste-carrying coils consistently reach the 75°C target required for total pathogen removal. To ensure the system can be maintained by local technicians without specialized software, the plant’s design and documentation were created using highly accessible, non-proprietary tools. The research identifies a critical energy challenge in the Malawian context. Field data revealed that the waste collected is often extremely diluted by water, providing as little as 6% of the thermal energy required for self-powered treatment. This confirms that energy independence is impossible without adding high-energy organic waste or using external fuel. Furthermore, a salt-based tracer study was conducted on a standard tank to track the movement of fluids. The results empirically demonstrated "hydraulic short- circuiting," where a portion of the incoming waste travels through the tank too quickly, bypassing the required heating time even when the average temperature appears correct. Biological testing confirmed that bacteria survived these "fast tracks," proving that simple tank designs are insufficient for public safety. The findings highlight that guaranteed disinfection depends as much on the path the fluid takes as it does on the temperature. The study concludes that decentralized systems must use forced-path designs, such as internal pipe coils, to ensure every particle of waste is heated for the required duration. By combining mass-produced hardware with standardized documentation and automated control logic, this research provides a safer, more transparent, and more scalable framework for waste treatment. These results suggest that focusing on technical transparency and hardware standardization is essential for the long-term success of sanitation infrastructure in rapidly growing urban centers.